ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vdwE1 - ECOD Domain | ECOD

ECOD/Domains/e2vdwE1

e2vdwE1

UID: 000341775

PDB

Range: E:545-844
PDB: 2VDW chain E(all domains)
UniProt: P04298 (all domains)
Gene: OPG113

Molecule: VACCINIA VIRUS CAPPING ENZYME D1 SUBUNIT

3D Structure

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Related Domains

Browse other domains in mRNA_G-N7_MeTrfase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilymRNA_G-N7_MeTrfase(2003.1.5.28)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF03291mRNA_G-N7_MeTrfase

mRNA (guanine-N(7))-methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2VDW RCSB PDB: 2VDW PDBe: 2VDW UniProt: P04298

Downloads

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Drug annotations from DrugDomain.