ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2vdwG1 - ECOD Domain | ECOD

ECOD/Domains/e2vdwG1

e2vdwG1

UID: 000341776

PDB

Range: G:545-844
PDB: 2VDW chain G(all domains)
UniProt: P04298 (all domains)
Gene: OPG113

Molecule: VACCINIA VIRUS CAPPING ENZYME D1 SUBUNIT

3D Structure

Loading viewer...

Related Domains

Browse other domains in mRNA_G-N7_MeTrfase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilymRNA_G-N7_MeTrfase(2003.1.5.28)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF03291mRNA_G-N7_MeTrfase

mRNA (guanine-N(7))-methyltransferase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2VDW RCSB PDB: 2VDW PDBe: 2VDW UniProt: P04298

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.