ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vdwH1 - ECOD Domain | ECOD

ECOD/Domains/e2vdwH1

e2vdwH1

UID: 000341780

PDB

Range: H:1-287
PDB: 2VDW chain H(all domains)
UniProt: P04318 (all domains)
Gene: OPG124

Molecule: MRNA-CAPPING ENZYME SMALL SUBUNIT

3D Structure

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Related Domains

Browse other domains in Pox_mRNA-cap →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyPox_mRNA-cap(2003.1.5.29)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03341Pox_mRNA-cap

Poxvirus mRNA capping enzyme, small subunit

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2VDW RCSB PDB: 2VDW PDBe: 2VDW UniProt: P04318

Downloads

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