ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q53L25_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q53L25_F1_nD3

Q53L25_F1_nD3

UID: 003424816

AlphaFold

Range: 396-580
AlphaFold: AF-Q53L25
UniProt: Q53L25 (all domains)
Gene: LOC_Os11g14980

Protein: Os11g0256100 protein (Pentatricopeptide, putative)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PPR, PPR_2, E_motif →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, E_motif(109.4.1.1254)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

PF20431E_motif

E motif

ClanCL0020TPR

External Links

AlphaFold DB: Q53L25 UniProt: Q53L25

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 396-580