ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vd9A2 - ECOD Domain | ECOD

ECOD/Domains/e2vd9A2

e2vd9A2

UID: 000342496

PDB

Range: A:14-249
PDB: 2VD9 chain A(all domains)
UniProt: Q81VF6 (all domains)

Molecule: ALANINE RACEMASE

3D Structure

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Related Domains

Browse other domains in Ala_racemase_N →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAla_racemase_N(2002.1.1.53)

Ligands

in contact, ≤ 4 Å

{1-[(3-Hydroxy-Methyl-5-Phosphonooxy-Methyl-Pyridin-4-Ylmethyl)-Amino]-Ethyl}-Phosphonic AcidIN5
drugDrugBank DB03327
Chloride ionCL
(1S)-1-[((1E)-{3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYLENE)AMINO]ETHYLPHOSPHONIC ACID

Pfam Families

PF01168Ala_racemase_N

Alanine racemase, N-terminal domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 2VD9 RCSB PDB: 2VD9 PDBe: 2VD9 UniProt: Q81VF6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.