ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B9F1C0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/B9F1C0_F1_nD2

B9F1C0_F1_nD2

UID: 003427403

AlphaFold

Range: 1066-1230
AlphaFold: AF-B9F1C0
UniProt: B9F1C0 (all domains)
Gene: SHOC1

Protein: Protein SHORTAGE IN CHIASMATA 1 homolog (OsSHOC1)

3D Structure

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Related Domains

Browse other domains in SHOC1_PDDEXK_dom →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilySHOC1_PDDEXK_dom(2008.1.1.151)

Pfam Families

PF28664SHOC1_PDDEXK_dom

SHOC1 PDDEXK domain

ClanCL0236PDDEXK

External Links

AlphaFold DB: B9F1C0 UniProt: B9F1C0

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1066-1230