ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B9F1C0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B9F1C0_F1_nD1

B9F1C0_F1_nD1

UID: 003427404

RepresentativeAlphaFold

Range: 636-915,946-955
AlphaFold: AF-B9F1C0
UniProt: B9F1C0 (all domains)
Gene: SHOC1

Protein: Protein SHORTAGE IN CHIASMATA 1 homolog (OsSHOC1)

3D Structure

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Related Domains

Browse other domains in DUF5587 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupHelical bundle insertion in helicase domains(3930)

HH-groupHelical bundle in Hef helicase(3930.1)

TT-groupHelical bundle in Hef helicase(3930.1.1)

FFamilyDUF5587(3930.1.1.10)

Pfam Families

PF17825SHOC1_ATPase

SHOC1 ATPase domain

ClanCL0023P-loop_NTPase

External Links

AlphaFold DB: B9F1C0 UniProt: B9F1C0

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 636-915,946-955