ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vugB1 - ECOD Domain | ECOD

ECOD/Domains/e2vugB1

e2vugB1

UID: 000343150

PDB

Range: B:243-382
PDB: 2VUG chain B(all domains)
UniProt: Q9UYG2 (all domains)
Gene: PAB1020

Molecule: PAB1020

3D Structure

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Related Domains

Browse other domains in Lig_C →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyLig_C(2.1.1.95)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP
(4R)-2-METHYLPENTANE-2,4-DIOLMRD

+ 1 additive ((4r)-2-Methylpentane-2,4-Diol)

(4r)-2-Methylpentane-2,4-DiolMPD

Pfam Families

Ligase Pab1020 C-terminal region

ClanCL0021OB

External Links

ECOD PDB View: 2VUG RCSB PDB: 2VUG PDBe: 2VUG UniProt: Q9UYG2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03564

Shown in the structure viewer. Drug annotations from DrugDomain.