ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Grishin Lab
UT Southwestern
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Q0J946_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q0J946_F1_nD1

Q0J946_F1_nD1

UID: 003434642

AlphaFold

Range: 1-185
AlphaFold: AF-Q0J946
UniProt: Q0J946 (all domains)
Gene: OSJNBb0004A17.12

Protein: OSJNBb0004A17.12 protein (Os04g0672700 protein)

3D Structure

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Related Domains

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Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR(109.4.1.420)

Pfam Families

PPR repeat

ClanCL0020TPR

External Links

AlphaFold DB: Q0J946 UniProt: Q0J946

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-185