ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1sxjA2 - ECOD Domain | ECOD

ECOD/Domains/e1sxjA2

e1sxjA2

UID: 000003435

RepresentativePDB

Range: A:479-547
PDB: 1SXJ chain A(all domains)
UniProt: P38630 (all domains)
Gene: RFC1

Molecule: Activator 1 95 kDa subunit

3D Structure

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Related Domains

Browse other domains in AAA_lid_RFC1 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHistone-like(148)

HH-groupHistone-related(148.1)

TT-groupAAA+ ATPase lid domain(148.1.3)

FFamilyAAA_lid_RFC1(148.1.3.173)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

PF25361AAA_lid_RFC1

RFC1-like, AAA+ ATPase lid domain

ClanCL0671AAA_lid

External Links

ECOD PDB View: 1SXJ RCSB PDB: 1SXJ PDBe: 1SXJ UniProt: P38630

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Drug annotations from DrugDomain.