ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q6ZKM5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q6ZKM5_F1_nD1

Q6ZKM5_F1_nD1

UID: 003438404

AlphaFold

Range: 1-30,61-320
AlphaFold: AF-Q6ZKM5
UniProt: Q6ZKM5 (all domains)
Gene: Os08g0499800

Protein: Os08g0499800 protein (cDNA clone:J033080D22, full insert sequence)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3(109.4.1.1256)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: Q6ZKM5 UniProt: Q6ZKM5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1-30,61-320