ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1q9wA1 - ECOD Domain | ECOD

ECOD/Domains/e1q9wA1

e1q9wA1

UID: 000034403

PDB

Range: A:1-106
PDB: 1Q9W chain A(all domains)
UniProt: Q52L64 (all domains)
Gene: Igkv8-30

Molecule: S45-18 Fab (IgG1k) light chain

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 1Q9W RCSB PDB: 1Q9W PDBe: 1Q9W UniProt: Q52L64

Downloads

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