ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JL31_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JL31_F1_nD1

Q5JL31_F1_nD1

UID: 003442831

AlphaFold

Range: 6-515
AlphaFold: AF-Q5JL31
UniProt: Q5JL31 (all domains)
Gene: Os01g0301000

Protein: Os01g0301000 protein (cDNA clone:J013054P19, full insert sequence) (cDNA clone:J033005A18, full insert sequence)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3(109.4.1.1256)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: Q5JL31 UniProt: Q5JL31

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-515