ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2axiA1 - ECOD Domain | ECOD

ECOD/Domains/e2axiA1

e2axiA1

UID: 000003444

RepresentativePDB

Range: A:25-109
PDB: 2AXI chain A(all domains)
UniProt: Q00987 (all domains)
Gene: MDM2

Molecule: Ubiquitin-protein ligase E3 Mdm2

3D Structure

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Related Domains

Browse other domains in SWIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

3-(N-morpholino)propanesulfonic acidMPO
drugDrugBank DB03434

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

ECOD PDB View: 2AXI RCSB PDB: 2AXI PDBe: 2AXI UniProt: Q00987

Downloads

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Drug annotations from DrugDomain.