ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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B9FDD2_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/B9FDD2_F1_nD1

B9FDD2_F1_nD1

UID: 003444022

AlphaFold

Range: 6-200
AlphaFold: AF-B9FDD2
UniProt: B9FDD2 (all domains)
Gene: Os04g0683100

Protein: Pre-mRNA cleavage factor Im 25 kDa subunit

3D Structure

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Related Domains

Browse other domains in NUDIX_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX_2(221.4.1.8)

Pfam Families

PF13869NUDIX_2

Nucleotide hydrolase

ClanCL0261NUDIX

External Links

AlphaFold DB: B9FDD2 UniProt: B9FDD2

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-200