ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q84SD0_F1_nD3 - ECOD Domain | ECOD

ECOD/Domains/Q84SD0_F1_nD3

Q84SD0_F1_nD3

UID: 003446134

AlphaFold

Range: 321-505,526-535
AlphaFold: AF-Q84SD0
UniProt: Q84SD0 (all domains)
Gene: Os08g0162200

Protein: Os08g0162200 protein (cDNA clone:002-118-E03, full insert sequence)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3, E_motif →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3, E_motif(109.4.1.1272)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

PF20431E_motif

E motif

ClanCL0020TPR

External Links

AlphaFold DB: Q84SD0 UniProt: Q84SD0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 321-505,526-535