ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vmcA1 - ECOD Domain | ECOD

ECOD/Domains/e2vmcA1

e2vmcA1

UID: 000344710

PDB

Range: A:161-257
PDB: 2VMC chain A(all domains)
UniProt: P42530 (all domains)
Gene: dscE

Molecule: DISCOIDIN-2

3D Structure

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Related Domains

Browse other domains in H_lectin →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupAgglutinin HPA-like(4182)

HH-groupAgglutinin HPA-like(4182.1)

TT-groupAgglutinin HPA-like(4182.1.1)

FFamilyH_lectin(4182.1.1.2)

Ligands

in contact, ≤ 4 Å

alpha-N-Acetyl-D-galactosamineA2G
drugDrugBank DB03567within 5 Å only
Chloride ionCL
2-acetamido-2-deoxy-beta-D-galactopyranoseNGA

Pfam Families

PF09458H_lectin

H-type lectin domain

ClanCL0840H_lectin

External Links

ECOD PDB View: 2VMC RCSB PDB: 2VMC PDBe: 2VMC UniProt: P42530

Downloads

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within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.