ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5N8X0_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5N8X0_F1_nD1

Q5N8X0_F1_nD1

UID: 003447366

AlphaFold

Range: 81-235
AlphaFold: AF-Q5N8X0
UniProt: Q5N8X0 (all domains)
Gene: Os01g0874800

Protein: Os01g0874800 protein (cDNA clone:001-044-D07, full insert sequence)

3D Structure

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Related Domains

Browse other domains in 5_3_exonuc_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamily5_3_exonuc_N(2006.1.4.4)

Pfam Families

PF027395_3_exonuc_N

5'-3' exonuclease, N-terminal resolvase-like domain

ClanCL0280PIN

External Links

AlphaFold DB: Q5N8X0 UniProt: Q5N8X0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 81-235