ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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UT Southwestern
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Q5N8X0_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5N8X0_F1_nD2

Q5N8X0_F1_nD2

UID: 003447368

AlphaFold

Range: 236-330
AlphaFold: AF-Q5N8X0
UniProt: Q5N8X0 (all domains)
Gene: Os01g0874800

Protein: Os01g0874800 protein (cDNA clone:001-044-D07, full insert sequence)

3D Structure

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Related Domains

Browse other domains in 5_3_exonuc →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupSAM domain-like(102.1.1)

FFamily5_3_exonuc(102.1.1.4)

Pfam Families

PF013675_3_exonuc

5'-3' exonuclease, C-terminal SAM fold

ClanCL04645_3_exonuc_C

External Links

AlphaFold DB: Q5N8X0 UniProt: Q5N8X0

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 236-330