ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dayA4 - ECOD Domain | ECOD

ECOD/Domains/e3dayA4

e3dayA4

UID: 000345192

PDB

Range: A:33-205
PDB: 3DAY chain A(all domains)
UniProt: Q08AH3 (all domains)
Gene: ACSM2A

Molecule: Acyl-coenzyme A synthetase ACSM2A, mitochondrial precursor

3D Structure

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Related Domains

Browse other domains in AMP-binding →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupCoA-dependent acyltransferases(323)

HH-groupCoA-dependent acyltransferases(323.1)

TT-groupCoA-dependent acyltransferases(323.1.1)

FFamilyAMP-binding(323.1.1.3)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Glycerin, Tromethamine)

GlycerinGOL
DrugBank DB09462
TromethamineTRS

Pfam Families

PF00501AMP-binding

AMP-binding enzyme

ClanCL0378ANL

External Links

ECOD PDB View: 3DAY RCSB PDB: 3DAY PDBe: 3DAY UniProt: Q08AH3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.