ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dgvB1 - ECOD Domain | ECOD

ECOD/Domains/e3dgvB1

e3dgvB1

UID: 000345515

PDB

Range: B:1A-92A
PDB: 3DGV chain B(all domains)
UniProt: Q2KIG3 (all domains)
Gene: CPB2

Molecule: Carboxypeptidase B2

3D Structure

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Related Domains

Browse other domains in Propep_M14 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupProtease propeptides/inhibitors(304.7)

TT-groupProtease propeptides/inhibitors(304.7.1)

FFamilyPropep_M14(304.7.1.1)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
Zinc ionZN
metalwithin 5 Å only

+ 2 additives (Sulfate ion, Malonate Ion)

Pfam Families

PF02244Propep_M14

Carboxypeptidase activation peptide

ClanCL0570PPP-I

External Links

ECOD PDB View: 3DGV RCSB PDB: 3DGV PDBe: 3DGV UniProt: Q2KIG3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546
Malonate IonMLI
DrugBank DB02201within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.