ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jjuA1 - ECOD Domain | ECOD

ECOD/Domains/e2jjuA1

e2jjuA1

UID: 000346517

PDB

Range: A:3-116
PDB: 2JJU chain A(all domains)
UniProt: O00241 (all domains)
Gene: SIRPB1

Molecule: SIGNAL REGULATORY PROTEIN BETA-1

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 2JJU RCSB PDB: 2JJU PDBe: 2JJU UniProt: O00241

Downloads

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