ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jjvB1 - ECOD Domain | ECOD

ECOD/Domains/e2jjvB1

e2jjvB1

UID: 000346520

PDB

Range: B:2-116
PDB: 2JJV chain B(all domains)
UniProt: Q5TFQ8 (all domains)
Gene: SIRPB1

Molecule: SIGNAL-REGULATORY PROTEIN BETA 1.

3D Structure

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Related Domains

Browse other domains in V-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyV-set(11.1.1.99)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Immunoglobulin V-set domain

ClanCL0159E-set

External Links

ECOD PDB View: 2JJV RCSB PDB: 2JJV PDBe: 2JJV UniProt: Q5TFQ8

Downloads

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