ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5SND3_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5SND3_F1_nD2

Q5SND3_F1_nD2

UID: 003466131

AlphaFold

Range: 266-505
AlphaFold: AF-Q5SND3
UniProt: Q5SND3 (all domains)
Gene: Os06g0172000

Protein: Os06g0172000 protein (cDNA clone:J013158I18, full insert sequence)

3D Structure

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Related Domains

Browse other domains in PPR, PPR_2, PPR_3 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPR, PPR_2, PPR_3(109.4.1.1256)

Pfam Families

PPR repeat

ClanCL0020TPR

PPR repeat family

ClanCL0020TPR

Pentatricopeptide repeat domain

ClanCL0020TPR

External Links

AlphaFold DB: Q5SND3 UniProt: Q5SND3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-505