ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vyvD2 - ECOD Domain | ECOD

ECOD/Domains/e2vyvD2

e2vyvD2

UID: 000346672

PDB

Range: D:0-148,D:313-333
PDB: 2VYV chain D(all domains)
UniProt: Q9ESV6 (all domains)
Gene: Gapdhs

Molecule: GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE

3D Structure

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Related Domains

Browse other domains in Gp_dh_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyGp_dh_N(2003.1.1.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128
SN-GLYCEROL-1-PHOSPHATE1GP
within 5 Å only

+ 1 additive (Formic acid)

Pfam Families

PF00044Gp_dh_N

Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 2VYV RCSB PDB: 2VYV PDBe: 2VYV UniProt: Q9ESV6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Formic acid

DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.