ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dupB1 - ECOD Domain | ECOD

ECOD/Domains/e3dupB1

e3dupB1

UID: 000347523

PDB

Range: B:2-282
PDB: 3DUP chain B(all domains)
UniProt: Q2RXX6 (all domains)
Gene: Rru_A0214

Molecule: MutT/nudix family protein

3D Structure

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Related Domains

Browse other domains in DUF4743 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyDUF4743(221.4.1.10)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF15916DUF4743

Domain of unknown function (DUF4743)

ClanCL0261NUDIX

External Links

ECOD PDB View: 3DUP RCSB PDB: 3DUP PDBe: 3DUP UniProt: Q2RXX6

Downloads

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