ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vakJ1 - ECOD Domain | ECOD

ECOD/Domains/e2vakJ1

e2vakJ1

UID: 000347972

PDB

Range: J:10-426
PDB: 2VAK chain J(all domains)
UniProt: Q9E6F8 (all domains)

Molecule: SIGMA A

3D Structure

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Related Domains

Browse other domains in Sigma_1_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCore protein VP6(3132)

HH-groupCore protein VP6(3132.1)

TT-groupCore protein VP6(3132.1.1)

FFamilySigma_1_2(3132.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03084Sigma_1_2

Reoviral Sigma1/Sigma2 family

External Links

ECOD PDB View: 2VAK RCSB PDB: 2VAK PDBe: 2VAK UniProt: Q9E6F8

Downloads

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