ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3edhA1 - ECOD Domain | ECOD

ECOD/Domains/e3edhA1

e3edhA1

UID: 000348267

PDB

Range: A:1-200
PDB: 3EDH chain A(all domains)
UniProt: P13497 (all domains)
Gene: BMP1

Molecule: Bone morphogenetic protein 1

3D Structure

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Related Domains

Browse other domains in Astacin →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyAstacin(2498.1.1.2)

Ligands

in contact, ≤ 4 Å

Acetyl groupACE
Zinc ionZN
metal

+ 1 additive (Dimethyl sulfoxide)

Dimethyl sulfoxideDMS

Pfam Families

PF01400Astacin

Astacin (Peptidase family M12A)

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3EDH RCSB PDB: 3EDH PDBe: 3EDH UniProt: P13497

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.