ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vaqB1 - ECOD Domain | ECOD

ECOD/Domains/e2vaqB1

e2vaqB1

UID: 000348347

PDB

Range: B:29-333
PDB: 2VAQ chain B(all domains)
UniProt: P68175 (all domains)
Gene: STR1

Molecule: STRICTOSIDINE SYNTHASE

3D Structure

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Related Domains

Browse other domains in Str_synth →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyStr_synth(5.1.3.12)

Ligands

in contact, ≤ 4 Å

(2S,3R,4S)-methyl 4-(2-(2-(1H-indol-3-yl)ethylamino)ethyl)-2-((2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yloxy)-3-vinyl-3,4-dihydro-2H-pyran-5-carboxylateVAW

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF03088Str_synth

Strictosidine synthase

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 2VAQ RCSB PDB: 2VAQ PDBe: 2VAQ UniProt: P68175

Downloads

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