ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A5K4F5C0_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A5K4F5C0_F1_nD5

A0A5K4F5C0_F1_nD5

UID: 003484191

AlphaFold

Range: 1736-1995
AlphaFold: AF-A0A5K4F5C0
UniProt: A0A5K4F5C0 (all domains)

Protein: Pre-mRNA-processing-splicing factor 8 (Splicing factor Prp8)

3D Structure

Loading viewer...

Related Domains

Browse other domains in PRP8_domainIV →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyPRP8_domainIV(2484.1.1.62)

Pfam Families

PF12134PRP8_domainIV

PRP8 domain IV core

ClanCL0219RNase_H

External Links

AlphaFold DB: A0A5K4F5C0 UniProt: A0A5K4F5C0

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1736-1995