ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cma31 - ECOD Domain | ECOD

ECOD/Domains/e3cma31

e3cma31

UID: 000348538

PDB

Range: 3:1-92
PDB: 3CMA chain 3(all domains)
UniProt: P32411 (all domains)
Gene: rpl44e

Molecule: 50S ribosomal protein L44E

3D Structure

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Related Domains

Browse other domains in Ribosomal_L44 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyRibosomal_L44(375.1.1.5)

Ligands

in contact, ≤ 4 Å

Cadmium ionCD
metal
Chloride ionCL
Magnesium ionMG
metal

Pfam Families

PF00935Ribosomal_L44

Ribosomal protein L44

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 3CMA RCSB PDB: 3CMA PDBe: 3CMA UniProt: P32411

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sodium ionNA

metal

Strontium ionSR

metal

Shown in the structure viewer. Drug annotations from DrugDomain.