ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3eebB1 - ECOD Domain | ECOD

ECOD/Domains/e3eebB1

e3eebB1

UID: 000350448

PDB

Range: B:5-205
PDB: 3EEB chain B(all domains)
UniProt: Q9KS12 (all domains)
Gene: rtxA

Molecule: RTX toxin RtxA

3D Structure

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Related Domains

Browse other domains in Peptidase_C80 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C80(7575.1.1.6)

Ligands

in contact, ≤ 4 Å

Phytic acidIHP
drugDrugBank DB14981
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11713Peptidase_C80

Peptidase C80 family

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 3EEB RCSB PDB: 3EEB PDBe: 3EEB UniProt: Q9KS12

Downloads

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