ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077ZJB8_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZJB8_F1_nD6

A0A077ZJB8_F1_nD6

UID: 003510192

AlphaFold

Range: 361-450
AlphaFold: AF-A0A077ZJB8
UniProt: A0A077ZJB8 (all domains)
Gene: TTRE_0000808801

Protein: Large ribosomal subunit protein uL6 (30S ribosomal protein S5, chloroplastic) (60S ribosomal protein L9) (Small ribosomal subunit protein uS5c)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyRibosomal_S5_C(212.1.1.16)

Pfam Families

PF03719Ribosomal_S5_C

Ribosomal protein S5, C-terminal domain

ClanCL0329S5

External Links

AlphaFold DB: A0A077ZJB8 UniProt: A0A077ZJB8

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 361-450