ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077ZJB8_F1_nD5 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZJB8_F1_nD5

A0A077ZJB8_F1_nD5

UID: 003517455

AlphaFold

Range: 296-360
AlphaFold: AF-A0A077ZJB8
UniProt: A0A077ZJB8 (all domains)
Gene: TTRE_0000808801

Protein: Large ribosomal subunit protein uL6 (30S ribosomal protein S5, chloroplastic) (60S ribosomal protein L9) (Small ribosomal subunit protein uS5c)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

AlphaFold DB: A0A077ZJB8 UniProt: A0A077ZJB8

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 296-360