ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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A0A077Z466_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/A0A077Z466_F1_nD4

A0A077Z466_F1_nD4

UID: 003518110

AlphaFold

Range: 1526-1775
AlphaFold: AF-A0A077Z466
UniProt: A0A077Z466 (all domains)
Gene: TTRE_0000289401

Protein: Pre mRNA processing splicing factor 8

3D Structure

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Related Domains

Browse other domains in U6-snRNA_bdg →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyU6-snRNA_bdg(2008.1.1.52)

Pfam Families

PF10596U6-snRNA_bdg

U6-snRNA interacting domain of PrP8

ClanCL0363H-int

External Links

AlphaFold DB: A0A077Z466 UniProt: A0A077Z466

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 1526-1775