ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

A0A077ZJB8_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/A0A077ZJB8_F1_nD2

A0A077ZJB8_F1_nD2

UID: 003520713

AlphaFold

Range: 76-120
AlphaFold: AF-A0A077ZJB8
UniProt: A0A077ZJB8 (all domains)
Gene: TTRE_0000808801

Protein: Large ribosomal subunit protein uL6 (30S ribosomal protein S5, chloroplastic) (60S ribosomal protein L9) (Small ribosomal subunit protein uS5c)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_S8 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S8, C-terminal domain(4988)

HH-groupRibosomal protein S8, C-terminal domain(4988.1)

TT-groupRibosomal protein S8, C-terminal domain(4988.1.1)

FFamilyRibosomal_S8(4988.1.1.1)

Pfam Families

PF00410Ribosomal_S8

Ribosomal protein S8

External Links

AlphaFold DB: A0A077ZJB8 UniProt: A0A077ZJB8

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 76-120