ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P07339_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P07339_F1_nD1

P07339_F1_nD1

UID: 003522295

AlphaFold

Range: 21-410
AlphaFold: AF-P07339
UniProt: P07339 (all domains)
Gene: CTSD

Protein: Cathepsin D (EC 3.4.23.5) [Cleaved into: Cathepsin D light chain; Cathepsin D heavy chain]

3D Structure

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Related Domains

Browse other domains in Asp,A1_Propeptide →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupacid protease(1.1.1)

FFamilyAsp,A1_Propeptide(1.1.1.2)

Ligands

in contact, ≤ 4 Å

DB02216
drugDrugBank DB02216within 5 Å only
DB03028
drugDrugBank DB03028within 5 Å only
DB03096

Pfam Families

Eukaryotic aspartyl protease

ClanCL0129Peptidase_AA

PF07966A1_Propeptide

A1 Propeptide

External Links

AlphaFold DB: P07339 UniProt: P07339

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-410

drugDrugBank DB03096within 5 Å only

DB07542

drugDrugBank DB07542within 5 Å only

DB08740

drugDrugBank DB08740within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.