ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3f4nF1 - ECOD Domain | ECOD

ECOD/Domains/e3f4nF1

e3f4nF1

UID: 000352913

PDB

Range: F:2-243
PDB: 3F4N chain F(all domains)
UniProt: Q8ZCP4 (all domains)
Gene: pdxJ

Molecule: Pyridoxine 5'-phosphate synthase

3D Structure

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Related Domains

Browse other domains in PdxJ →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPdxJ(2002.1.1.116)

Ligands

in contact, ≤ 4 Å

Pyridoxine phosphatePXP
drugDrugBank DB02209

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Pyridoxal phosphate biosynthesis protein PdxJ

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3F4N RCSB PDB: 3F4N PDBe: 3F4N UniProt: Q8ZCP4

Downloads

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Drug annotations from DrugDomain.