ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3f92A1 - ECOD Domain | ECOD

ECOD/Domains/e3f92A1

e3f92A1

UID: 000352944

PDB

Range: A:156-200
PDB: 3F92 chain A(all domains)
UniProt: P61086 (all domains)
Gene: UBE2K

Molecule: Ubiquitin-conjugating enzyme E2 K

3D Structure

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Related Domains

Browse other domains in UBA →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-groupRuvA-C, UBA, CRAL/TRIO-N, HBS1(103.1)

TT-groupUBA-like domain(103.1.1)

FFamilyUBA(103.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Tromethamine, Tetraethylene glycol)

TromethamineTRS
DrugBank DB03754
Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

UBA/TS-N domain

ClanCL0214UBA

External Links

ECOD PDB View: 3F92 RCSB PDB: 3F92 PDBe: 3F92 UniProt: P61086

Downloads

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