ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P35247_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P35247_F1_nD1

P35247_F1_nD1

UID: 003531467

AlphaFold

Range: 226-375
AlphaFold: AF-P35247
UniProt: P35247 (all domains)
Gene: SFTPD

Protein: Pulmonary surfactant-associated protein D (PSP-D) (SP-D) (Collectin-7) (Lung surfactant protein D)

3D Structure

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Related Domains

Browse other domains in Lectin_C,Surfac_D-trimer →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupC-type lectin-like(209)

HH-groupC-type lectin-like(209.1)

TT-groupC-type lectin-like(209.1.1)

FFamilyLectin_C,Surfac_D-trimer(209.1.1.3)

Ligands

in contact, ≤ 4 Å

Beta-D-Glucose
drugDrugBank DB02379within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00059Lectin_C

Lectin C-type domain

ClanCL0056C_Lectin

PF09006Surfac_D-trimer

Lung surfactant protein D coiled-coil trimerisation

External Links

AlphaFold DB: P35247 UniProt: P35247

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 226-375