ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P48065_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P48065_F1_nD1

P48065_F1_nD1

UID: 003531644

AlphaFold

Range: 31-585
AlphaFold: AF-P48065
UniProt: P48065 (all domains)
Gene: SLC6A12

Protein: Sodium- and chloride-dependent betaine transporter (BGT-1) (Na(+)/Cl(-) betaine/GABA transporter) (Solute carrier family 6 member 12)

3D Structure

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Related Domains

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Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilySNF(5051.1.1.1)

Ligands

in contact, ≤ 4 Å

DB08848
drugDrugBank DB08848within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Sodium:neurotransmitter symporter family

ClanCL0062APC

External Links

AlphaFold DB: P48065 UniProt: P48065

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 31-585