ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P51003_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P51003_F1_nD2

P51003_F1_nD2

UID: 003538072

AlphaFold

Range: 216-365
AlphaFold: AF-P51003
UniProt: P51003 (all domains)
Gene: PAPOLA

Protein: Poly(A) polymerase alpha (PAP-alpha) (EC 2.7.7.19) (Polynucleotide adenylyltransferase alpha)

3D Structure

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Related Domains

Browse other domains in PAP_central →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyPAP_central(102.1.3.3)

Ligands

in contact, ≤ 4 Å

Cordycepin Triphosphate
drugDrugBank DB01860within 5 Å only
DB02153
drugDrugBank DB02153within 5 Å only
Triphosphoric acid

Pfam Families

PF04928PAP_central

Poly(A) polymerase central domain

External Links

AlphaFold DB: P51003 UniProt: P51003

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 216-365

drugDrugBank DB03896within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.