ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3fdxB1 - ECOD Domain | ECOD

ECOD/Domains/e3fdxB1

e3fdxB1

UID: 000353988

PDB

Range: B:-1-141
PDB: 3FDX chain B(all domains)
UniProt: A6T8F5 (all domains)
Gene: ynaF

Molecule: Putative filament protein / universal stress protein F

3D Structure

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Related Domains

Browse other domains in Usp →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilyUsp(2005.1.1.3)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Magnesium ionMG
metal

+ 1 additive (Formic acid)

Pfam Families

Universal stress protein family

ClanCL0039HUP

External Links

ECOD PDB View: 3FDX RCSB PDB: 3FDX PDBe: 3FDX UniProt: A6T8F5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Formic acid

DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.