ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q96JS3_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q96JS3_F1_nD1

Q96JS3_F1_nD1

UID: 003541871

AlphaFold

Range: 36-120
AlphaFold: AF-Q96JS3
UniProt: Q96JS3 (all domains)
Gene: PGBD1

Protein: PiggyBac transposable element-derived protein 1 (Cerebral protein 4)

3D Structure

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Related Domains

Browse other domains in SCAN →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilySCAN(170.1.1.1)

Pfam Families

SCAN domain

ClanCL0148Viral_Gag

External Links

AlphaFold DB: Q96JS3 UniProt: Q96JS3

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-120