ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q13003_F1_nD4 - ECOD Domain | ECOD

ECOD/Domains/Q13003_F1_nD4

Q13003_F1_nD4

UID: 003542319

AlphaFold

Range: 431-535,766-810
AlphaFold: AF-Q13003
UniProt: Q13003 (all domains)
Gene: GRIK3

Protein: Glutamate receptor ionotropic, kainate 3 (GluK3) (Excitatory amino acid receptor 5) (EAA5) (Glutamate receptor 7) (GluR-7) (GluR7)

3D Structure

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Related Domains

Browse other domains in Lig_chan-Glu_bd →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPeriplasmic binding protein-like II(7523)

HH-groupPeriplasmic binding protein-like II(7523.1)

TT-groupPeriplasmic binding protein-like II(7523.1.1)

FFamilyLig_chan-Glu_bd(7523.1.1.20)

Ligands

in contact, ≤ 4 Å

Glutamic acid
drugDrugBank DB00142within 5 Å only
DB00237
drugDrugBank DB00237within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF10613Lig_chan-Glu_bd

Ligated ion channel L-glutamate- and glycine-binding site

ClanCL0177PBP

External Links

AlphaFold DB: Q13003 UniProt: Q13003

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 431-535,766-810