ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P01133_F1_nD6 - ECOD Domain | ECOD

ECOD/Domains/P01133_F1_nD6

P01133_F1_nD6

UID: 003546398

AlphaFold

Range: 481-740
AlphaFold: AF-P01133
UniProt: P01133 (all domains)
Gene: EGF

Protein: Pro-epidermal growth factor (EGF) [Cleaved into: Epidermal growth factor (Urogastrone)]

3D Structure

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Related Domains

Browse other domains in Ldl_recept_b →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group6-bladed(5.1.3)

FFamilyLdl_recept_b(5.1.3.2)

Ligands

in contact, ≤ 4 Å

DB00364
drugDrugBank DB00364within 5 Å only
Alpha-Aminobutyric Acid
drugDrugBank DB04454within 5 Å only
DB11973

Pfam Families

PF00058Ldl_recept_b

Low-density lipoprotein receptor repeat class B

ClanCL0186Beta_propeller

External Links

AlphaFold DB: P01133 UniProt: P01133

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 481-740

drugDrugBank DB11973within 5 Å only

DB12843

drugDrugBank DB12843within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.