ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q9Y2Z4_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q9Y2Z4_F1_nD1

Q9Y2Z4_F1_nD1

UID: 003548697

AlphaFold

Range: 36-390
AlphaFold: AF-Q9Y2Z4
UniProt: Q9Y2Z4 (all domains)
Gene: YARS2

Protein: Tyrosine--tRNA ligase, mitochondrial (EC 6.1.1.1) (Tyrosyl-tRNA synthetase) (TyrRS)

3D Structure

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Related Domains

Browse other domains in tRNA-synt_1b →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHUP domain-like(2005)

HH-groupHUP domains(2005.1)

TT-groupHUP domains(2005.1.1)

FFamilytRNA-synt_1b(2005.1.1.2)

Ligands

in contact, ≤ 4 Å

Tyrosine
drugDrugBank DB00135within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00579tRNA-synt_1b

tRNA synthetases class I (W and Y)

ClanCL0039HUP

External Links

AlphaFold DB: Q9Y2Z4 UniProt: Q9Y2Z4

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 36-390