ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P61769_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P61769_F1_nD1

P61769_F1_nD1

UID: 003548864

AlphaFold

Range: 21-119
AlphaFold: AF-P61769
UniProt: P61769 (all domains)
Gene: B2M

Protein: Beta-2-microglobulin [Cleaved into: Beta-2-microglobulin form pI 5.3]

3D Structure

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Related Domains

Browse other domains in C1-set →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyC1-set(11.1.1.96)

Ligands

in contact, ≤ 4 Å

3-Indolebutyric Acid
drugDrugBank DB02740within 5 Å only
N-Formylmethionine
drugDrugBank DB04464within 5 Å only
DB09130

Pfam Families

Immunoglobulin C1-set domain

ClanCL0159E-set

External Links

AlphaFold DB: P61769 UniProt: P61769

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 21-119

drugDrugBank DB09130within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.