ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P07237_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P07237_F1_nD2

P07237_F1_nD2

UID: 003549719

AlphaFold

Range: 136-235
AlphaFold: AF-P07237
UniProt: P07237 (all domains)
Gene: P4HB

Protein: Protein disulfide-isomerase (PDI) (EC 5.3.4.1) (Cellular thyroid hormone-binding protein) (Prolyl 4-hydroxylase subunit beta) (p55)

3D Structure

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Related Domains

Browse other domains in Thioredoxin_6 →

Classification

AArchitecturea+b three layers(a.12)

XX-groupThioredoxin-like(2485)

HH-groupThioredoxin-like(2485.1)

TT-groupThioredoxin-like(2485.1.1)

FFamilyThioredoxin_6(2485.1.1.43)

Ligands

in contact, ≤ 4 Å

DB01593
drugDrugBank DB01593within 5 Å only
Ribostamycin
drugDrugBank DB03615within 5 Å only
DB09130

Pfam Families

PF13848Thioredoxin_6

Thioredoxin-like domain

ClanCL0172Thioredoxin

External Links

AlphaFold DB: P07237 UniProt: P07237

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 136-235

drugDrugBank DB09130within 5 Å only

DB11638

drugDrugBank DB11638within 5 Å only

DB14487

drugDrugBank DB14487within 5 Å only

DB14533

drugDrugBank DB14533within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.