ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P47870_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/P47870_F1_nD1

P47870_F1_nD1

UID: 003550344

AlphaFold

Range: 36-240
AlphaFold: AF-P47870
UniProt: P47870 (all domains)
Gene: GABRB2

Protein: Gamma-aminobutyric acid receptor subunit beta-2 (GABA(A) receptor subunit beta-2) (GABAAR subunit beta-2)

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

DB00395
drugDrugBank DB00395within 5 Å only
Ethanol
drugDrugBank DB00898within 5 Å only
DB01567

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

AlphaFold DB: P47870 UniProt: P47870

Representative

This domain is classified based on similarity to:

Downloads

Download Domain PDB Download Domain FASTA Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 36-240

drugDrugBank DB01567within 5 Å only

DB06716

drugDrugBank DB06716within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.